Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKDKYIVLCLLCAIATSNLSAVTVFAQDAQTILTQATTVTDQTSEKAGENSSAEATSASESVSSEATTVVPEASLPSTDLHAQPADSKTAPTETVIEGQTETNPTTSPDKQFLQQAIPKEKHRLGRKQIQANPKLQLLVSL |
2JNA Chain:A ((1-30)) | MKKRIIAAALLATVASFSTLAAEQVSKQEISHFKLVKVGTINVSQSGGQISSPSDLREKLSELADAKGGKYYHIIAAREHGPNFEAVAEVYNDATKLEHHHHHH-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JNA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -428 for 69 contacts (-6.2/contact) +
2D Compatibility (PS) -3217 + (NN) 82 + (LL) 2436
1D Compatibility (HY) 800 + (ID) 450
Total energy: -777.0 ( -11.26 by residue)
QMean score : -0.067
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