Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKFLKRLIALIIIIFIGYRLVIIHENVKKVLQYHDLVQNTLAENGSEANVHLVLSMIYTETKGDAIDVM--------QSSESISGTTNSITDSHTSIKHGVTLLSQNISQAKKAKVDVWTAVQAY---NFGSSYIDYVADHGGENSIELAKNYSKNVVAPSLGNYNGDTYFYYHPLALISGGKLYKNGGNIYYSREVQFNLYLIKIMELF |
2V36 Chain:A ((154-282)) | -------------------------------------LEEALDKWGTRSMKQLITPSIKLAEKGFPIDSVLAEAISDYQEKLSRTAAKDVFLPNGEPLKEGDTLIQKDL--AKTFKLIRSKGTDAFYKGKFAKTLSDTVQDFGGSMTEKDLENYDITIDEPIWGDYQGYQIATTPPPSSGGIFLLQMPKILDHFNLSDVRSWEKYQLLAET |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12509 for 615 contacts (-20.3/contact) +
2D Compatibility (PS) -12434 + (NN) -826 + (LL) 4728
1D Compatibility (HY) -2400 + (ID) 1500
Total energy: -24941.0 ( -40.55 by residue)
QMean score : 0.205
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