Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKTIQKELEGLDIRFDEPLKKYTYTKVGGPADYLAFPRNRLELSRIVKFANSQNIPWMVLGNASNIIVRDGGIRGFVIMFDKLSTVTV----NGYVIEAEAGANLIETTRIARYHSLTGFEFACGIPGSVGGAVFMNAGAYGGEIAHILLSAQ-VLTPQGELKTIEARNMQFGYRHSVI----QESGDIVISAKFALKPGDHLMITQEMDRL--------------TYLR--ELKQPLEYPSCGSVFKRP-----------------PGH---------FAGQLISEAHLKGQRIGGVEVSQKHAGFMVNIAEGSAQDYENLIEHVINTVESTSGVHLEPEVRIIGESLL |
| 1MBB Chain:A ((3-332)) | -----------------HSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YRGTVII-NRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKLPDPKVNGNAGSFFKNPVVSAETAKALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKGMQIGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -157202 for 2303 contacts (-68.3/contact) +
2D Compatibility (PS) -29300 + (NN) -1088 + (LL) 1548
1D Compatibility (HY) -16800 + (ID) 4050
Total energy: -206892.0 ( -89.84 by residue)
QMean score : 0.501
|
|
|