Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVMKIIELKEATVQVSNGLAEMKTILDHVNLSIYEHDFITILGGNGAGKSTLFNVIAGTLMLSGGNIYIMGQDVTNLPAEK----RAKYLSRVFQDPKMGTAPRMTVAENL---LVAKFRG-------EKRPLVPRKITNYTEEFQKLIARTGNGLDRHLETPTGLLSGGQRQALSLLMATLKKPNLLLLDEHTAALDPRTSVSLMGLTDEFIKQDSLTALMITHHMEDALKYGNRILVMKDGKIVRDLNQAQKNKMAIADYYQLFD |
| 1L2T Chain:A ((1-226)) | ----MIKLKNVTKTYKMG-EEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQ--QFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFAN-------------HKPNQL-SGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVA-RFGERIIYLKDGEVEREEKLR--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121132 for 1704 contacts (-71.1/contact) +
2D Compatibility (PS) -22740 + (NN) -5755 + (LL) 2992
1D Compatibility (HY) -14400 + (ID) 3700
Total energy: -164735.0 ( -96.68 by residue)
QMean score : 0.464
|
|
|