Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEFKNIIVTGGAGFIGSNFVHYVYNNHPYVHVTVLDKLTYAGNRANIEAIL-GDRVELVVGDIAD-AELVDKLAA-KADAIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGNGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRIGETYLIGADGEKNNKEVLELILEKM-----GQP------KDAYDHVTDRAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENETWWKAEKDAVEAKYAKTQEVIK |
1BXK Chain:A ((1-343)) | ---MRKILITGGAGFIGSALVRYIINETSDA-VVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDF----------FTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITF---------RYAIDASKIARELGCVPQET-FESGMRKTVQWYLANESWWKQVQDGSYQGER------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125199 for 2651 contacts (-47.2/contact) +
2D Compatibility (PS) -33000 + (NN) -11118 + (LL) 820
1D Compatibility (HY) -29200 + (ID) 7700
Total energy: -205397.0 ( -77.48 by residue)
QMean score : 0.586
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