Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKVRRHFTDDFKQQIVD-LYNVGRK-RSSLIKVYELT---PSTFDK-WVRQAKTTGSFKSVDNLTDEQRELIELRKHNKELEMQLDILKQAAVIMAQKGK
4EPZ Chain:A ((84-152))
-------------KQVILDRIYNIMSQLPASLLKMRLLTWGYSETYDEELAHEAHQLIETWNISDLTDEQKEIIEELRNFEENQYPWEEVQE----------
General information:
TITO was launched using:
RESULT:
Template:
4EPZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15064 for 348 contacts (43.3/contact) +
2D Compatibility (PS) -6754 + (NN) -3854 + (LL) 2216
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: 1122.0 ( 3.22 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_4EPZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EPZ-query.scw
PDB file :
Tito_Scwrl_4EPZ.pdb
: