Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYFRNYWYRFGAILFIILAVILLVFRPDWSMLHYLLYFNFMALLAHQFEEYQFPGGASPIINYVVYDEEELMDRFPGNTQSIMLVNTIAWLLYIASIAFPQAYWLGLGVMFFSLTQLLGHGFQMNIKLKTWYNPGLATTVFLLVPIACAYIYQASAEGMLTWGDWLGGFIMLIVCVLTSIIAPVQLLKDKKTNYIISPWQMDRFHKVINFVRIKK |
| 1MS8 Chain:A ((170-215)) | -------------------------------------------------------------------------------------------------------------------------------------------------PVSLKEFFPAEMEGMHT-NQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13584 for 191 contacts (-71.1/contact) +
2D Compatibility (PS) -4838 + (NN) 907 + (LL) 13212
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -7103.0 ( -37.19 by residue)
QMean score : -0.329
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