Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYLTAGESHGPSLTAIIEGIPAGLKLSAKDINEDLKRRQGGYGRGNRMKIETDQVIISSGVRHGKTLGSPITLTVTNKDHSKWLDIMSVEDIEERLKQKRRIKHP-RPGHADLVGGIKYRFDDLRNALERSSARETTMRVAIGAIAKRILKEIGIEIANHIVVFGGKEITVPDKLTVQQIKVLSSQSQVAIVNPSFEQEIKDYIDSVKKAGDTIGGV-------IETIVGGVPVGLGSYVHWDRKLDAKIAQAVVSINAFKGVEFGLGFKSGFLKGSQVMDSISWTKDQGYIRQSNNLGGFEGGMTNGEPIIVRGVMKPIPTLYKPLMSVDIDTHEPYRATVERSDPTALPAAGVVMEAVVATVLVTEVLEKFSSDNMYELKEAVKLYRNYVNHF |
| 1UM0 Chain:A ((8-357)) | LRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRRQGGRNVFITPRKEDDKVEITSGVFEDFSTGTPIGFLIHNQ--------------RARSKDYDNIKNLFRPSHADFTYFHKYGIRDFRGG-GRSSARESAIRVAAGAFAKMLLREIGIVCESGIIEIGG--IKAKNYDFNHALK-----SEIFALDEEQEEAQKTAIQNAIKNHDSIGGVALIRARSIKT-NQKLPIGLGQGLYA--KLDAKIAEAMMGLNGVKAVEIGKGVESSLLKGSEYND---LMDQKGFL--SNRSGGVLGGMSNGEEIIVRVHFKPTPSIFQPQRTIDINGNECECLLKGRHDPCIAIRGSVVCESLLALVLADMVLLNLTSKIEYLKTIYNEN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105387 for 2659 contacts (-39.6/contact) +
2D Compatibility (PS) -36924 + (NN) -14874 + (LL) 3464
1D Compatibility (HY) -18400 + (ID) 6750
Total energy: -178871.0 ( -67.27 by residue)
QMean score : 0.412
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