Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKWLVIVSCFVAFLGLGACANKQDQAKNEKLKVVVTNSILADITKNIAGNKIDLHSIVPVGKDPHEYEPLPADVEKTTQADLVFYNGINLETGGNAWFTKLIKNAKKK-DNKDYFAVSDGVDVIYLNGQSG-KGKEDPHAWLNLENGIIYSKNIAKQLIAKDPKNKATYEKNRDAYVAKLEKLDKEAKSKFNAIPANKKLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQITSLVKKLKQVRPSALFVESSVDKRPMKSVSRESGIPIYAEIFTDSIAKKGQKGDSYYAMMKWNLDKIAEGLAK
4NNP Chain:A ((14-286))------------------------------KLKVVTTNSILYDMAKNVGGDNVDIHSIVPVGQDPHEYEVKPKDIKKLTDADVILYNGLNLETG-NGWFEKALEQAGKSLKDKKVIAVSKDVKPIYLN-EEGNKDKQDPHAWLSLDNGIKYVKTIQQTFIDNDKKHKADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGITPGYIWEINTEKQGTPEQMRQAIEFVKKHKLKHLLVETSVDKKAMESLSEE----IFGEVYTDSIGKEGTKGDSYYKMMKSNIETVHGSMK-


General information:
TITO was launched using:
RESULT:

Template: 4NNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74755 for 2177 contacts (-34.3/contact) +
2D Compatibility (PS) -29018 + (NN) -15537 + (LL) 2280
1D Compatibility (HY) -26400 + (ID) 7350
Total energy: -150780.0 ( -69.26 by residue)
QMean score : 0.612

(partial model without unconserved sides chains):
PDB file : Tito_4NNP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NNP-query.scw
PDB file : Tito_Scwrl_4NNP.pdb: