Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRCPKCGYNKSSVVDSRQAEEGTTIRRRRECEKCGNRFTTFERLEELPLLVIKKDGTREQFSRDKILNGIIQSAQKRPVSSEDIENCILRIERKIRSEYEDEVSSITIGNLVMDELAELDEITYVRFASVYKSFKDVDEIEELLQQITKRVRSKKSGSV |
2Y5B Chain:A ((188-212)) | -----------------------------KCQACGYRSTTFEVFCDLSLPIPKKKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDSPVYQLYALCNHSGSVHYGHYT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 191 for 61 contacts (3.1/contact) +
2D Compatibility (PS) -2674 + (NN) 1184 + (LL) 1580
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -1919.0 ( -31.46 by residue)
QMean score : 0.152
|
|
|