Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSKLMDKYGITEDSSIDLIKASIASFWKNVVYMFPITLILFFLMNISNSKYLQEWFYFVSILIVFVVMYYFTNRQYIKSYSTTFKGSKNLRIELVEIIKRLPLSYFSTHDLTDLSQTVMADVSKIEQALSHAICAYYGWIGYFVFLSLSLLIGSLQLGLCIIVPVITALLILYLSKNIQYRINRKYYKKLRENSQAFQDSFEMQQDIKSYNMQHTVRKDVQDKLKDSEKIQIKTELFTTIPSSLLSILPQFSIALVIIFGFQLYLTGQIQLIFYIGYIICATKVASGFTGMLDSLLMIINFQSSF---KQVTAIRKTPLQEGVNADIQTFNVEFRDVSFAYEKGRNVVSNLSFNANQGEVTAIVGPSGCGKSTILKLLSRLYDYNAGQILIGGKDISEISTNSLFENISTVFQDVELFDDTIFENIKCGNPKATIEEVLEAAKIANVDEIADKFVDKYDTKIGENGSKLSGGERQRISIARAILKDAPIILLDEISASLDIENEIKIQAGLDKLIKNKTVIIVSHRMKSIENANKIIVIENGKVENFGTHSYLLENSTRYRKLVECSQLASEYEY
3NH9 Chain:A ((21-292))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFIDMENMFDLLKEETEVKDLPGAGPLR--FQKGRIEFENVHFSYADGRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVVNADQILVIKDGCIVERGRHEALLSRGGVYADMWQLQQGQ-----


General information:
TITO was launched using:
RESULT:

Template: 3NH9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136629 for 2114 contacts (-64.6/contact) +
2D Compatibility (PS) -28927 + (NN) -7373 + (LL) 27092
1D Compatibility (HY) -19600 + (ID) 5700
Total energy: -171137.0 ( -80.95 by residue)
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_3NH9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NH9-query.scw
PDB file : Tito_Scwrl_3NH9.pdb: