Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVMDSLIIKQLIKSTFDIPLQVTYPNGNIETYNGNNPHVKLKLNKNFSVSELSKDPSIVLGEAVMDGDIEIDGSIQELILSAYRCGDSFLRNSKFSKLIPKQFHDKKHSKSDIQKHYDIGNDFYKLWLDDTMTYSCAYFKHENDSLEQAQLNKVHHILNKLNAQPGGKLLDIGCGWGTLIITAAKEYGLNATGITLSEEQASFITKRIKEEGLENKVTVLIKDYRDIHETYDYITSVGMFEH-------VGKENLSQYFQTISKRLNINGLALIHGITGQVGDNHGS---GTNS---------WINKYIFPGGYIPRLTENLNHIASAGLQIADLEPLRRHYQKTLELWTKNFHNALPEVQKTHDKRFINMWDLYLQSCAASFESGNIDIFQYLLSKGVSKDTMPMTRDYMYSAN |
| 3HEM Chain:A ((20-302)) | ----------------------------------------------------------------------------------------------------------------VRSHYDKSNEFFKLWLDPSMTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT--IPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRIGANYVPTLNAWADALQAHKDEAIALKGQETCDIYMHYLRGCSDLFRDKYTDVCQFTLVK------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138648 for 2181 contacts (-63.6/contact) +
2D Compatibility (PS) -28148 + (NN) -8448 + (LL) 6832
1D Compatibility (HY) -16400 + (ID) 4650
Total energy: -189462.0 ( -86.87 by residue)
QMean score : 0.521
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