Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRIQKNILREFEMESSEQALAIWSVLSDVYDKSPWSLSQISEDLKKDSTDYFFVYNDGEVIGFLA------------LQQLVGEVEITNIAVKKNYQGKGYAYQLM-----SMIADIEVP-VFLEVRYSNIVAQKLYERCGFVVLGKRKNYYHDPIEGAIVMRKG
2X7B Chain:A ((45-166))
------------------------------------------EHLKEYGLAFFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKLNFKKVKVLKGYYADGEDAYLMARP-
General information:
TITO was launched using:
RESULT:
Template:
2X7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63804 for 641 contacts (-99.5/contact) +
2D Compatibility (PS) -11323 + (NN) -2391 + (LL) 3780
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -85988.0 ( -134.15 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_2X7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X7B-query.scw
PDB file :
Tito_Scwrl_2X7B.pdb
: