Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKVLTACGNGMGSSMVIKMKVENALRQLGVSNFESASCSVGEAKGLAANYDIVVASNHLIHELDGRT----KGHLVGLDNLMD-DNEIKTKLQEIL
1E2B Chain:A ((3-95))
KKHIYLFSSAGMSTS-LLVSKMRAQAEKYEVP-VIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAV
General information:
TITO was launched using:
RESULT:
Template:
1E2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21488 for 700 contacts (-30.7/contact) +
2D Compatibility (PS) -9370 + (NN) -1187 + (LL) 128
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -36167.0 ( -51.67 by residue)
QMean score : 0.261
(partial model without unconserved sides chains):
PDB file :
Tito_1E2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E2B-query.scw
PDB file :
Tito_Scwrl_1E2B.pdb
: