Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAIDKLVKASHL-IDMNDIIREGNPTLRKVAEEVTFPLSEKEEILGEKMMQFLKHSQDPIMAEKLGLRGGVGLAAPQLDISKRIIAVLVPNVEDAQGNPPKEAYSLQEVMYNPKVVSHSVQDAALSDGEGCLSVDREVPGYVVRHARVTIEYFDKTGEKHRLKLKGYNSIVVQHEIDHIDGIMFYDRINEKNPFAVKEGLLILE
3G6N Chain:A ((1-191))
---------GSHMMITMDDIIREGNPTLREVAKEVSLPLSEEDISLGKEMLEFLKNSQDPIKAEELHLRGGVGLAAPQLDISKRIIAVHVPS-------------SLSTVMYNPKILSHSVQDACLGEGEGCLSVDREVPGYVVRHAKITVSYYDMNGEKHKIRLKNYESIVVQHEIDHINGVMFYDHINDQNPFALKEGVLVIE
General information:
TITO was launched using:
RESULT:
Template:
3G6N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83002 for 1404 contacts (-59.1/contact) +
2D Compatibility (PS) -19326 + (NN) -5811 + (LL) 1304
1D Compatibility (HY) -24400 + (ID) 6600
Total energy: -137835.0 ( -98.17 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_3G6N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G6N-query.scw
PDB file :
Tito_Scwrl_3G6N.pdb
: