Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIALINENSQASKNTIIYKELKAVSDEKGFEVFNYGMYGKEEESQLTYVQNGLLTAILLNSGAADFVITGCGTGIGAMLACNSFPGVVCGFAADPVDAYLFSQVNGGNALSLPFAKGFGWGAELNLRYLFERLFEDEKGGGYPKERAVPEQRNARILSEIKQITYRDLLSVLKEIDQDFLKETISGEHFQEYFFANCQNQNIADYLKSVLD
3PH4 Chain:A ((36-126))
-------------------REIADFLKKRGYEVIDFGTHGNE---SVDYPDFGLKVAEAVKSGECDRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALDIVDTWLKAEFQGGRHATRVGKIGEIEKKYS---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3PH4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58997 for 623 contacts (-94.7/contact) +
2D Compatibility (PS) -10222 + (NN) -8194 + (LL) 5524
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -75739.0 ( -121.57 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_3PH4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PH4-query.scw
PDB file :
Tito_Scwrl_3PH4.pdb
: