Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKLTLVYISLSGNTQSFVKRLSEQLSTWHNCQVSTINIKEQNHQTFPVDQPFVALLPTYLEGGNGIDNGDQEILTIPLGDFIAAHNNVKNCIGIVGSGNRNFNNQYCLTAKQYSERFGFPMLGDFELRGTSSDVERIANIIVETLSNFKA
4BMO Chain:B ((1-107))
---MLVAYDSMTGNVKRFI----------HKLNMPAVQIDED----LVIDEDFI--LITYT---TGFGNVPERVL-----DFLERNN--EKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNNDVEYFKERVREIATH---
General information:
TITO was launched using:
RESULT:
Template:
4BMO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69202 for 830 contacts (-83.4/contact) +
2D Compatibility (PS) -11288 + (NN) -2922 + (LL) 1920
1D Compatibility (HY) -10400 + (ID) 1800
Total energy: -93692.0 ( -112.88 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_4BMO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BMO-query.scw
PDB file :
Tito_Scwrl_4BMO.pdb
: