Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKELITKQKTWEIILLVVSGILIPVILAIIKMKVNSIKYISITDHNILNIDSKGKLQYINKTKIFSNLINHQLTVENKGNMKQAITEIIISQIKKVETHIPDIQLDGGFYEKFQKYLLIGYNNGNIESKVE--TIRLQVCSVE-----QNTFCENLIDEIFSDDKIIDSGSVESIFLIDLKKYYSIFDNNKKLSDLKIIALDENGNEIQGFFILVRYDRDEKMFKPHPRGLAGPGVEKLPLIDITKDVTKATAKTHQILEQGANQVGFNILVDRTCILKYKVKIKSGHKVIIDNSNYEVKIRIPEYNQEVGMLEGDFYYFIYDNVVELENHFVYSKQNIKTISPKLVFDKYRTVKEIYK |
4EN8 Chain:B ((104-167)) | --------------------------------------------------------------------------------------------------------------YNTYEKYELINYQNGNIDDKAEYYLPSLGKCEVSDAPSPQAPVVETPVDQ----DGFIQTGPNENIIVGVINPSENIEEISTPIPDDYTYNIPTSIQNNACYVLFKVNTTGVYKITTKNNLPPLIIYEAIGSSNRNMNSNNLSNDNIKAIKYITGLNRSDAKSYLIVSLFKDKNYYIRIPQISSSTTSQLIFKRELGNISDLADSTVNILDNLNTSGTHYYTRQSPDVGNYISYQLTIPGDFNNIASSIF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4EN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4084 for 190 contacts (21.5/contact) +
2D Compatibility (PS) -6077 + (NN) 927 + (LL) 9936
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: 2920.0 ( 15.37 by residue)
QMean score : 0.157
|
|
|