Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYIQNLELTSYRNYDHAE--LQFENKVNVIIGENAQGKTNLMEAI-YVLS--MAKSHRTSNDKELI------RWDKDYAKIEGRVMKQNGAIPM---QLVISKK----GKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLV---------KGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKIGDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK |
| 1XEX Chain:A ((3-164)) | -YIEKLELKGFKSYGNKKVVIPFSKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASRISDLIFAGSKNEPPAKYAEVAIYFNNEDRGFPIDEDEVVIRRRVYPDGRSSYWLNGRRATRSEILDILTAAMISPDGYNIVLQGDITKFIKMSPLERRLLID------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16370 for 840 contacts (-19.5/contact) +
2D Compatibility (PS) -13946 + (NN) 1406 + (LL) 18304
1D Compatibility (HY) -11200 + (ID) 2050
Total energy: -23856.0 ( -28.40 by residue)
QMean score : 0.294
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