Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIHLGDDFVVSTRDIVGIFDFKANMSPIVEEFLKKQKHKVVPSVNGTPKSIVVTVQNIYYSPLSSSTLKKRAQFMFEIDS
4A8X Chain:B ((669-682))
---------------------------------------------------------CIYWLPLTPEAIAE----------
General information:
TITO was launched using:
RESULT:
Template:
4A8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1984 for 42 contacts (47.2/contact) +
2D Compatibility (PS) -1536 + (NN) -1048 + (LL) 5176
1D Compatibility (HY) -2000 + (ID) 200
Total energy: 2376.0 ( 56.57 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_4A8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A8X-query.scw
PDB file :
Tito_Scwrl_4A8X.pdb
: