Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGGMGNMQKMMKQMQKMQKDMAKAQEELAEKVVEGTAGGGMVTVKANGQKEILDVIIKEEVVDPEDIDMLQDLVLAATNEALKKVDEITNETMGQFTKGMNMPGLF
3LKB Chain:A ((296-329))
-------------------------------------------------------------------------IAVEAIRRAQERFKRITNETVYQAIVGMNGPNAF
General information:
TITO was launched using:
RESULT:
Template:
3LKB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4172 for 182 contacts (-22.9/contact) +
2D Compatibility (PS) -3599 + (NN) -2291 + (LL) 5808
1D Compatibility (HY) -800 + (ID) 650
Total energy: -5704.0 ( -31.34 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_3LKB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LKB-query.scw
PDB file :
Tito_Scwrl_3LKB.pdb
: