Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDETVKLNHTCVICDQE-KNRG------------IHL--YTKFICLDCERKVISTSTSDPDYAFYVKKLKSIHTPPLYS
3O9X Chain:A ((2-54))
-------HMKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDA-------------------
General information:
TITO was launched using:
RESULT:
Template:
3O9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1588 for 191 contacts (8.3/contact) +
2D Compatibility (PS) -3849 + (NN) 205 + (LL) 1896
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -4660.0 ( -24.40 by residue)
QMean score : 0.089
(partial model without unconserved sides chains):
PDB file :
Tito_3O9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O9X-query.scw
PDB file :
Tito_Scwrl_3O9X.pdb
: