Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQFQIGDMVARKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRLIADSDFSDLVAVKKDEQMMRKKKDESRMNE-----SLELLRQDYKLLRE----KQEYY----ATSQYQHQEHYFHMP-GKVLHLDGDEAY----LKKCLNVYKKIGVPVYGIHCHEKKMSASIEVLLDKYRPDILVITGHDA-------YS--KQKGGIDDLNAYRHSKHFVETVQTARKKIPHLDQLVIFAGACQSHFESLIRAGANFASSPSRVNIHALDP--VYIVAKISFTPFMERINVWEVLRNTLTREKGLGGIETRGVLRIGMPYKSN |
| 3J16 Chain:A ((35-271)) | -------------------------------------------------------VDKDDELIFKKKFTSKLDEAGKKKSTDLVKLKIKVISEDFDMKDEYLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTIIKQNFNKFMQ---KLLNEACNIEYKSDTAAVVLQEGIAHVCLVTSSSTILKQKIEYSMPKKKRTTDVLKFDEKTEKFYKAIYSAMKKDLNFDKLKTII-LCSPGFYAKILMDKIFQYAEEEHNKKILDNKGMFFIAHCS-TGYLQGIN--EVLKNPLYASK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15036 for 1294 contacts (-11.6/contact) +
2D Compatibility (PS) -21169 + (NN) 2081 + (LL) 5532
1D Compatibility (HY) -14800 + (ID) 2950
Total energy: -46342.0 ( -35.81 by residue)
QMean score : 0.137
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