Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRILEKAPAKINLSLDVTRKRPDGYHEVEMIMTTIDLADRIEL--TELAEDEVRVSSHNRFVPDDQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDVSFCVYGGTALATGRGEKIKHISTPPHCWVILAKPTIGVSTAEVYRAL-KLDGIEHPDVQG----MIEAIEEKSFQKMCSRLGNVLESVTLDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD |
3PYG Chain:A ((9-280)) | -----RVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLEL-VGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFALHGGTALGTGRGEELATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSG------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124817 for 2252 contacts (-55.4/contact) +
2D Compatibility (PS) -29179 + (NN) -12783 + (LL) 2472
1D Compatibility (HY) -18800 + (ID) 4900
Total energy: -188007.0 ( -83.48 by residue)
QMean score : 0.518
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