Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIEVIALVK
3QUW Chain:A ((24-144))
----VSTKLAPPAAASYSQAMKANNFVYVSGQIPYTPDNKPVQGSISEKAEQVFQNVKNILAESNSSLDNIVKVNVFLADMKNFAEFNSVYAKHFHTHKPARSCVGVASLPLNVDLEMEVIAVEK
General information:
TITO was launched using:
RESULT:
Template:
3QUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67586 for 916 contacts (-73.8/contact) +
2D Compatibility (PS) -13158 + (NN) -5514 + (LL) 468
1D Compatibility (HY) -11600 + (ID) 3200
Total energy: -100590.0 ( -109.81 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_3QUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUW-query.scw
PDB file :
Tito_Scwrl_3QUW.pdb
: