Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIMQGLLFFYVLLHVNEGEFRIYIFLAVLLGVATYQSLCKRIYIKILKFVIYLVVSVYQFFKKLIQHVLFRPIVWTCGAIIWLAAFLFKKTYSLIGFLLLCLYKIVMVLCFPIRFIAKQCLKLLPVKMRLTFRRYFEKGAGFLKKKKKLLITIRTTITRFLKR |
| 2Y69 Chain:K ((61-78)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------GIEWNPSPVGRVTPKEWR---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1475 for 47 contacts (31.4/contact) +
2D Compatibility (PS) -1595 + (NN) 858 + (LL) 21364
1D Compatibility (HY) -400 + (ID) 150
Total energy: 21552.0 ( 458.55 by residue)
QMean score : -0.115
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