Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFSRERTITEIQNDYKEQVERQNQLKKRRRKGLYRRLTVFGALVFLTAIVLASSVWSQTSSLSAKEEKKEQLEKELKSLKTKQTDLKEEISKLKDEDYVTELARRDLFMSGDGEIIFNVEKKSK
4U4P Chain:A ((643-706))
-------------------------------KRIMTRTVTLGGDVFDPHGTLSGGARSQAASILTKFQELKDVQDELRIKENELRALEEELAGLK------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4U4P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2523 for 251 contacts (10.1/contact) +
2D Compatibility (PS) -6988 + (NN) -2968 + (LL) 4584
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -4899.0 ( -19.52 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_4U4P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U4P-query.scw
PDB file :
Tito_Scwrl_4U4P.pdb
: