Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMNDALTSLACSLKPGTTIKGKWNGNTYTLRKQLGKGANGIVYLA--ETSDGHVALKVSD-----DSLSITSEVNVLKSFSKAQSVTMGPSFFDTDDAYIPSANTKVSFYAMEYIKGPLLLKYVSDK--GAEWIPVLMIQLLSSLSVLHQQGWIFGDLKPDNLIVTGPPARIRCIDVGGTTKEGRAIKEYTEFYDRGYW---------GYGTRKAEPSYDLFAVAMIMINSVHKKEFKKTNQPKEQLRSLIEGN--PLLQKYKKALFSALNGDYQSADEMKKDMLDAGQKAAQRKQPIKASPQPATRQRQQKPRQGKITKTRYTPKQKPAKSGGLFETTLIVISVLALYFAYIIFFLI |
| 4JDH Chain:A ((81-296)) | --------------------------------KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV----------VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYG-----PEVDIWSLGIMVIEMV-DGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66854 for 1432 contacts (-46.7/contact) +
2D Compatibility (PS) -21344 + (NN) -11755 + (LL) 9076
1D Compatibility (HY) -19600 + (ID) 2800
Total energy: -113277.0 ( -79.10 by residue)
QMean score : 0.386
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