Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYDKVSQAKS---IIIGTKQTVKALKRGSVKEVVVAKDADPI-LTSSVVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL
2FC3 Chain:A ((19-102))
-AYEAVKRARETGRIKKGTNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRLGEAAGIEVAAASVAII-
General information:
TITO was launched using:
RESULT:
Template:
2FC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69102 for 625 contacts (-110.6/contact) +
2D Compatibility (PS) -8867 + (NN) -3420 + (LL) 384
1D Compatibility (HY) -4800 + (ID) 1800
Total energy: -87605.0 ( -140.17 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_2FC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FC3-query.scw
PDB file :
Tito_Scwrl_2FC3.pdb
: