Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTINQLIRKGRVSKVENSKSPALNKGYNSFKKEHTNVSSPQKRGVCTRVGTMTPKKPNSALRKYARVRLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGVENRAQGRSKYGTKKPKAK
2YKR Chain:L ((2-123))--TVNQLVRKPRARKVAKSNVPALE-------------ACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA-


General information:
TITO was launched using:
RESULT:

Template: 2YKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27066 for 843 contacts (-32.1/contact) +
2D Compatibility (PS) -12924 + (NN) -4447 + (LL) 580
1D Compatibility (HY) -10000 + (ID) 4600
Total energy: -58457.0 ( -69.34 by residue)
QMean score : 0.487

(partial model without unconserved sides chains):
PDB file : Tito_2YKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YKR-query.scw
PDB file : Tito_Scwrl_2YKR.pdb: