Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSERNQRKVYQGRVVSDKMDKTITVVVETYKKHTLYGKRVKYSKKFKAHDENNQAKIGDIVKIMETRPLSATKRFRLVEVVEEAVII
4A2I Chain:Q ((5-82))
-------RTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAV--
General information:
TITO was launched using:
RESULT:
Template:
4A2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8875 for 488 contacts (-18.2/contact) +
2D Compatibility (PS) -8090 + (NN) 2221 + (LL) 932
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -23612.0 ( -48.39 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_4A2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A2I-query.scw
PDB file :
Tito_Scwrl_4A2I.pdb
: