Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVKKEKGRKRFRKRKTFGNQILPLELLIEKNKREIINSAELMEEIYMKIDEKHTQCVTK
4C46 Chain:A ((30-57))
------------------------IKKLIEANDREINLVPASIKQIEWKIEE--------
General information:
TITO was launched using:
RESULT:
Template:
4C46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90 for 102 contacts (-0.9/contact) +
2D Compatibility (PS) -3229 + (NN) -3228 + (LL) 2012
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -6685.0 ( -65.54 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_4C46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C46-query.scw
PDB file :
Tito_Scwrl_4C46.pdb
: