Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGQKAWVNIGKTEFILLLVVGILTIINVLTADGEKRTFHSPKKKNINHLTLYDCVSPEVQNSINETGRVTNFF
4YTL Chain:A ((52-87))
EPGDHVTVINGEHQGDAGLVLMVEQGQVTFMSTQTS--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4YTL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19365 for 156 contacts (-124.1/contact) +
2D Compatibility (PS) -3561 + (NN) 1180 + (LL) 1788
1D Compatibility (HY) 2400 + (ID) 300
Total energy: -17858.0 ( -114.47 by residue)
QMean score : 0.331
(partial model without unconserved sides chains):
PDB file :
Tito_4YTL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YTL-query.scw
PDB file :
Tito_Scwrl_4YTL.pdb
: