Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYRKLGRTSAQRKAMLRDLTTDLIINERIETTETRAKELRSVVEKMITLGKRGDLHARRQAAAYIRNEVANEENNQDALQKLFSDIATRYEERQGGYTRIMKLGP-RRGDGAPMAIIELV
1GD8 Chain:A ((14-117))---------SSHRLALYRNQAKSLLTHGRITTTVPKAKELRGFVDHLIHLAKRGDLHARRL--------VLRDLQDVKLVRKLFDEIAPRYRDRQGGYTRVLKLAERRRGDGAPLALVELV


General information:
TITO was launched using:
RESULT:

Template: 1GD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28318 for 712 contacts (-39.8/contact) +
2D Compatibility (PS) -11711 + (NN) -8220 + (LL) 1444
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -59505.0 ( -83.57 by residue)
QMean score : 0.639

(partial model without unconserved sides chains):
PDB file : Tito_1GD8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GD8-query.scw
PDB file : Tito_Scwrl_1GD8.pdb: