Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNQNQLISVEDIVFRYRKDAERRALDGVSLQVYEGEWLAIVGHNGSGKSTLARALNGLILPESGDIEVAGIQLTEESVWEVRKKIGMVFQNPDNQFVGTTVRDDVAFGLENNGVPREEMIERVDWAVKQV--NMQDFLDQEPHHLSGGQKQRVAIAGVIAARPDIIILDEATSMLDPIGREEVLETVRHLKEQGMATVISITHDLNEAAK-ADRIIVMNGGKKYAEGPPEEI-------FKLNKELVRIGLDL----PFSFQLSQLLRENGLALEENHLTQEGLVKELWTLQSKM |
4HLU Chain:A ((3-262)) | -GRIEVVNVSHI-FHRGTPLEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDG---ERKKGYEIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNF-YPDRDPVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLG-KTVILISHDIETVINHVDRVVVLEKGKKVFDGTRMEFLEKYDPRFFTSKMLVMRRLVLKGEDPFSMSDDELL---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69635 for 1927 contacts (-36.1/contact) +
2D Compatibility (PS) -26668 + (NN) -9023 + (LL) 3296
1D Compatibility (HY) -22000 + (ID) 5100
Total energy: -129130.0 ( -67.01 by residue)
QMean score : 0.439
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