Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVLSFMDVKRQKDFELEKNLLKELSLRQIIQSVKDCLEPLFPFLHDERDIITEGCIDFAIEAYLLGGRFGIFGYYGESMQSISARSAREEEELRMEFFDYLYNWIHEQYATFDKNTVYEAARKFIKDWWTAGFVQREKQCKLRMR
2JDD Chain:A ((27-65))
------------------------------------------------------EACM---FESDLLRGAFHLGGYYGGKLISIASFHQAEHSELQ---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JDD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7839 for 150 contacts (-52.3/contact) +
2D Compatibility (PS) -3861 + (NN) 326 + (LL) 10020
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -6154.0 ( -41.03 by residue)
QMean score : -0.137
(partial model without unconserved sides chains):
PDB file :
Tito_2JDD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JDD-query.scw
PDB file :
Tito_Scwrl_2JDD.pdb
: