Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHFYVWHIKRVKQLIIILIAAFAAASFFYIQRAVPLPVFSTDTGPKAIYKGETDSKD---ISLTFDISWGDERAEPILNTLKANGIKNATFFLSASWAERHPDTVARIVKDGHQIGSMGYAYKNYANLESSEIKKDMNRAQTAFEKLGVKDIQLLRPPTGQFNKNVLKVAKQYNYTVVHYSVNSQDWTNPGVEKIIDNVTKQVSGGDIILLHASDSAKQTEEALPDIIHQLKEKGLKNVTVGDLIANSDAKSAEVK |
2C1G Chain:A ((224-425)) | -----------------------------------------------ALYQSYFDKKHQKVVALTFDDGPNPATTPQVLETLAKYDIK-ATFFVLGKNVSGNEDLVKRIKSEGHVVGNHSWSHPILSQLSLDEAKKQITDTEDVLTKVLGSSSKLMRPPYGAITDD---IRNSLDLSFIMWDVDSLDWKSKNEASILTEIQHQVANGSIVLMH--DIHSPTVNALPRVIEYLKNQGYTFVTIPEML-NTRLKAHEL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C1G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80876 for 1588 contacts (-50.9/contact) +
2D Compatibility (PS) -21589 + (NN) -9858 + (LL) 5288
1D Compatibility (HY) -16000 + (ID) 2950
Total energy: -125985.0 ( -79.34 by residue)
QMean score : 0.612
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