Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYSKQWTRIILITSPFAIALSLLLSILYGAKHLSTDIVFTSLIHFD-PGNTDHQIIWHSRIPRAAGALLIGAALAVSGALMQGITRNYLASPSIMGVSDGSAFIITLCMVLLPQSSSIEMMIYSFIGSALGAVLVFGLAAMMPNGFTPVQLAIIGTVTSMLLSSLSAAMSIYFQISQDLSFWYSARLHQMSPDFLKLAAPFFLIGIIMAISLSKKVTAVSLGDDISKSLGQKKKTIKIMAMLSVIILTGSAVALAGKIAFVGLVVPHITRFLVGSDYSRLIPCSCILGGIFLTLCDLASRFINYPFETPIEVVTSIIGVPFFLYLIKRKGGEQNG |
4NH0 Chain:A ((246-316)) | ---------------------------------SANMTLTSLLHIDNPYNLDPAVLWRPRPQR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NH0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6408 for 96 contacts (-66.8/contact) +
2D Compatibility (PS) -2942 + (NN) -821 + (LL) 25108
1D Compatibility (HY) -2400 + (ID) 600
Total energy: 11937.0 ( 124.34 by residue)
QMean score : -0.139
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