Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDKTYEVTVPTDKIAITGSVESMEDAKLLDVHPQGAI-SFSGK--FPDMFKDITDKAEPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDS---KALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVK-----AAKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPI----WKSLKAVKEDHVYVNSVDPLAQGGTAWSKVRFLKAAAEKLTQN |
| 3MWF Chain:A ((38-262)) | -----------------------------------------------------------------------LGVKPVGAVESWTQKPKFEYIKNDLKD-TKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVFK-FKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAGG--YAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKS-DPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQV------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MWF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31722 for 1435 contacts (-22.1/contact) +
2D Compatibility (PS) -22792 + (NN) -13361 + (LL) 7984
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -75741.0 ( -52.78 by residue)
QMean score : 0.497
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