Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPVFPLILSAVLFLSCFFGARQTEASASKRAIDANQIVNRMSLDEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFAENVKTTKQTVQLTDDYQKASPKIPLMLSIDQEGGIVTRLGEGTNFPGNMALGAARSRINAYQT-------GSIIGKELSALGINTDFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLVSHGQERLREVELYPFQKAIDAGADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVTDALNMKAIADHFGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQTASIEQTIHDLIKRKKIKPVSLSKMNFASQVFKTEHEKQVKEADYIITGSYVVKNDPVVNDGVIDDTISDSSKWATVFPRAVMKAALQHNKPFVLMSLRNPYDAANFEEAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAKPKGTLPVDIPSVTKPGNTLYPLGYGLNIKTGRPL |
| 3SQL Chain:A ((83-351)) | ------------------------------------------------------------------------------------------------------------------EIPLLIAADIEEGVGQRFRGATEFPPPMAFGEIW-RTDPHQAIALAETMGATTAQEALSLGINWVLAPVLDVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQYAVLTTAKHFPGHGDTATDSHLALPTISHDDTRLNTVELPPFKAAIQGGVDAVMNAHLMIPAWDQQ------------YPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQFAAPDTVVVQAIAAGADILLMPPDVDG---------AIIAIETAIKTGQLSESRIYESVERIWQAKQK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SQL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86391 for 2268 contacts (-38.1/contact) +
2D Compatibility (PS) -28154 + (NN) -14811 + (LL) 25544
1D Compatibility (HY) -16400 + (ID) 5900
Total energy: -126112.0 ( -55.60 by residue)
QMean score : 0.491
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