Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKENNYHHLAQKILELCGGKSNISSYTHCMTRLRITPYDESKADAQALRKLDGVLGVVEAETLQIILGTGVVNHVTAAFSKLVSAEEGADVKEAAAKKKADINRKNATPFKLFLRKIASIFIPLIPALVASGLITGITKAIIQAGWLSADSQIAIILTVIGSGLFTYLGILVGINASKEFGGTPALGALAGI---LIINPEIAKISLFGEELLPGRGGLIGVLFAAIFIAYTEQFIRRFIPQSLDII-VTPTVSLLITGIVTYVVFMPLGGFISDAITSGLLSILDIGGIAAGFILGATFLPLVVTGLHQGLTPVHMELINSIGNDPLLPILAMGGAGQVGAAFAVFVKTKKTTLRKAIAGGLPSGLLGIGEPLIFGVTLPLGRPFLTACLGAGIGGAFQAYFQVATIAIGVSGLPLSFLVLPSQIILYIVGLFISYAAGFLLTYAFGYKDEMASQFD |
| 1NQY Chain:A ((42-152)) | ---------------------------------------------------------------------------------------------------------------------------------------------------LTREADPRVLLTVRS------KGQIAFPGGSLDAGETPTQAALREAQEEVALDP--AAVTLLGE---------LDDVFTPVGFHVT-PVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80250 for 606 contacts (-132.4/contact) +
2D Compatibility (PS) -10847 + (NN) -2919 + (LL) 24084
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -76232.0 ( -125.80 by residue)
QMean score : 0.056
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