Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNKPTLYWSLLMFKDWNFYIASTLKGLVFVGSQNKPIEELFEWARKRFPGSLLVEDDDKLEPYAVEITQYLEGKRKNFTVPVEYAGTQFQLAVWNALCEIPYGQTKSYSDIANDINKPAAVRAVGAAIGANPVLITVPCHRVIGKNGSLTGYRGGFEMKTLLLDLEKRASSEMDVPH
4ZYE Chain:A ((50-158))
--------------------------------------------------------RDDSSFTEFFHKLDLYFEGKPINLREPINLKTYPFRLSVFKEVMKIPWGKVMTYKQIADSLG--TSPRAVGMALSKNPILLIIPCHRVIAENG-IGGYSRGVKLKRALLELE-----------
General information:
TITO was launched using:
RESULT:
Template:
4ZYE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64882 for 742 contacts (-87.4/contact) +
2D Compatibility (PS) -11791 + (NN) -6041 + (LL) 4736
1D Compatibility (HY) -12400 + (ID) 2050
Total energy: -92428.0 ( -124.57 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_4ZYE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZYE-query.scw
PDB file :
Tito_Scwrl_4ZYE.pdb
: