Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKSKGSIESEISKSITQWEKDYLGRGSVSVKTDILRDMIIVNLKGILTPAEYVVCGSKEGMLSIKQTRSELVESGIEGLKDIILKITGEKVKSFHTDLSSRTGERVMVFKLCNDLEKNLEKIL
4HHU Chain:A ((13-61))
----LEALEKALKEMIRQAR-----KFAGTVTYTLSGNRLVIVITGVPEQVRKELAKE------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HHU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14264 for 270 contacts (-52.8/contact) +
2D Compatibility (PS) -5399 + (NN) 428 + (LL) 5368
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -15317.0 ( -56.73 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_4HHU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HHU-query.scw
PDB file :
Tito_Scwrl_4HHU.pdb
: