Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAIERSGYTFQPEFSVVRQNGAIHVYHQGEFVEEIEFEF--NGEYPDHDLIEELVNHYCFEHEI
2LJK Chain:A ((62-100))
------------------GGTGAFEIEINGQLV----FSKLENGGFPYEKDLIEAIRRASN----
General information:
TITO was launched using:
RESULT:
Template:
2LJK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13397 for 166 contacts (-80.7/contact) +
2D Compatibility (PS) -4012 + (NN) -600 + (LL) 2208
1D Compatibility (HY) -400 + (ID) 450
Total energy: -16651.0 ( -100.31 by residue)
QMean score : 0.173
(partial model without unconserved sides chains):
PDB file :
Tito_2LJK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LJK-query.scw
PDB file :
Tito_Scwrl_2LJK.pdb
: