Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNSAHNKNETTFQRSMKSRHLFMLSLGGVIGTGLFLSSGYTIQQAGPAGTILAYLVGAGIVYLVMLCLGELSVAMPVTGAFHTYAAKYIGPGTGFTVAWLYWLTWTVALGSEFTAAGLLMQRWFPHTSVWMWSAVFALFIFLLNAFSVKFFAESEFWFSSIKVLAIVLFILLGGSAMFGIIPIKGGEAAPMLSNFTAEGGLFPNGFVPILMTMLSVNFAFSGTELIGIAAGESVDPDKTIPKAIKTTVWRLSLFFVGTIFVLSGLIPIQDAGVIKSPFVAVFDRVGVPYAADIMNFVI----LTAILSAANSGLYASSRMLWSLSKEKTLHPTFAK-----------LTSKGTPFNALVFSMIGGILSLLSSVFAPDTVYVVLVSISGFAVVVVWMGIAASQFMFRKRYIEAGNKVTDLKYRTPLYPFVPIAAFLLCLASVVGIAFDPNQRIALYCGVPFMAICYAIYYVKNRKSQPAADMTHSK
3GIA Chain:A ((139-360))----------------------------------------------------------------------------------------------------------------------------------------------LNFFGSKAVGRAEFFIVLVKLLILGLFIFA------GLITIHPSYVIPDLAPSAVSGMIFASAIFFL---------SYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAK---PFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNM-EGVASITSAVFMVIYLFVIL------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 543 -84005 -154.70 -405.82
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -154.70
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.125

(partial model without unconserved sides chains):
PDB file : Tito_3GIA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GIA-query.scw
PDB file : Tito_Scwrl_3GIA.pdb: