Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQLFKSFDASEKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQTSAIEDLEELTDLYKQELNLRP---DRPFVLFGHSMGGMITFRLAQKL-EREGIFPQAVIISAIQPPHIQR----KKVSHLPDDQFLDHIIQLGGMPAELVENKEVMSFFLPSFRSDYRALEQF--ELYDLAQIQSPVHVFNGLDDKKCIRDAEGWKK-WAKDITFHQFDGGHMFLLSQTEEVAERIFAILNQHPIIQP
4XJV Chain:A ((31-252))---------ATFK--LICFPWMGGGSTHFAKWGQDTHDLLEVHSL-----------------QLVD--EVVCALQPVIQDKPFAFFGHSMGSYIAFRTALGLKENNQPEPLHLFLSSATPVHSKAWHRIPKDDELSEEQISHYLMEF-------AEAKEFVKQCSPIIRADLNIVRSCTSNVPSKAVLSCDLTCFVGSED--IAKDMEAWKDVTSGNAKIYQLPGGHFYLLDPANE-----------------


General information:
TITO was launched using:
RESULT:

Template: 4XJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 878 -123036 -140.13 -661.48
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -140.13
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_4XJV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XJV-query.scw
PDB file : Tito_Scwrl_4XJV.pdb: