Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKICYVLLSLVCVFLFSGCSAGEEASGKKEDVTLRIAWWGGQPRHDYTTKVIELYEKKNPHVHIEAEFANWDDYWKKLAPMSAAGQLPDVIQMDTAYLAQYGKKNQ-LEDLTPYTKDGTIDVSSIDENMLSGGKIDNKLYGFTLGVNVLSVIANEDLLKKAGVSINQENWTWEDYEKLAYDLQEKAGVYGSNGMHPPDIFFPYYL---------RTKGERFYK-----EDGTGLAYQDDQLFVDYFERQLRLVKAKTSPTPDESAQI---KGMEDDFIVKGKSAITWNYSNQYLGFARLTDSPLSLYLPP----EQMQEKALTLKPSMLFSIPKSSEHKKEAAKFINFFVNNEEANQLIKGERGVPVSDKVADAIKPKLNEEETNIVEYVETASKNISKA-DPPEPVGSA------EVIKLLKDTSDQILYQKVSPEKAAKTFRKKANEILERNN
4JXI Chain:A ((3-406))----------------------------SHMEVNLRMSWWGGNGRHQVTLKALEEFHKQHPNINVKAEYTGWDGHLSRLTTQIAGGTEPDVMQTNWNWLPIFSKDGTGFYNL--FSVKEQLDLAQFDPKELQQTTVNGKLNGIPISVTAMIFYFNDATWAKAGLEYPK---TWDELLAAGKVFKEKLG----------DQYYPVVLCAGQTLVLIRSYMTQKYNIPTIDEANKKFAYSPEQ-WVEFFTMYKTMVDNHVMPSTKYYASIVKSSYYEMKPWINGEWAGTYMWNSTITKYSDNLTKPAKLVLGPYPMLPGAKDAGLFFLPAQMLSIGKSTKHPQESAMLINFLLNSKEGVEALGLERGVPLSATAVTQLR------ASGVIKDEDPSVAGLNMALELPHPMTTSPYFLDWQIWSLFLDAIQYIDYGQKTVQETAEYFNKQGDRILKR--


General information:
TITO was launched using:
RESULT:

Template: 4JXI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1875 -136442 -72.77 -363.84
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -72.77
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_4JXI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JXI-query.scw
PDB file : Tito_Scwrl_4JXI.pdb: