Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMDGIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKTRQVHGGEYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKTVKTHVSNLLAKLEVADRTQAALFAVKYNLNGEISK
4YN8 Chain:A ((6-193))IRVMLIDDHPVVRAGLRSILDSFDDITVVAEASDGSN----INTKGIDVVVTDIQMPGTDGI-TLTRALANAGGPPVLILTTYDTEADILAAVEAGAMGYLLKDA-PESALHDAVVATFEGRRTLA--PEVANALMQRVSKPRQA---LSAREIEILQNLEQGLSNRQLAAKLFISEATVKTHLVHIYSKLGVDNRTAA---------------


General information:
TITO was launched using:
RESULT:

Template: 4YN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 840 -93305 -111.08 -496.30
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -111.08
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_4YN8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YN8-query.scw
PDB file : Tito_Scwrl_4YN8.pdb: