Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFLIGANGQIGQRLVS-LFQDNPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIAAAAKGCDAIIFTAGSGGSTGYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRENWNEALKPY---YVAKHYADKILEASGLTYTIIRPG---------GLR--NEPGTGTVSAAKDLERGFISRDDVAKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL
2VRB Chain:A ((2-198))-SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDY-NQPESLQKAFAGVSKLLFISGP----HYDNTLLIVQH--ANVVKAARDAGVKHIAYTGYAFA------EESIIPLAHVHLATEYA---IRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNS-VTRNELALAAATVLTEEGHENKTYNL--------------


General information:
TITO was launched using:
RESULT:

Template: 2VRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 854 -124178 -145.41 -682.30
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -145.41
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.589

(partial model without unconserved sides chains):
PDB file : Tito_2VRB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VRB-query.scw
PDB file : Tito_Scwrl_2VRB.pdb: