Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEYEFVRVELSTMRRRPKEDYQQIIHDYAKRGWRFVQIFAPSIDGYGAAAYFEIIFERDAEKA
1RDA Chain:A ((61-91))----EHCEVILSTDSQYVRQGITQWIHNWKKRGWK-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 1RDA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 20 -1294 -64.68 -41.73
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -64.68
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.614

(partial model without unconserved sides chains):
PDB file : Tito_1RDA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RDA-query.scw
PDB file : Tito_Scwrl_1RDA.pdb: